• rRNA break associated with increase fidelity of translation

    From RonO@rokimoto557@gmail.com to talk-origins on Sun Jul 12 09:58:55 2026
    From Newsgroup: talk.origins

    https://www.science.org/content/article/molecular-quirk-unique-octopuses-makes-them-better-building-proteins

    chrome-extension://efaidnbmnnnibpcajpcglclefindmkaj/https://www.biorxiv.org/content/10.64898/2026.06.25.734654v2.full.pdf

    The paper may not have passed peer review. I do not know what journal
    they are submitting the paper to. It does not have a materials and
    methods section, so it is not clear how they accomplished some of what
    they claim to have done.

    They found that one lineage of octopus cuts the ribosomal RNA in the E
    helix. The break is in the middle of a highly conserved sequence that
    has remained unchanged in octopus for around 100 million years. So
    unlike all other organisms that have a single 28S rRNA in this lineage
    the 28S RNA is broken into two fragments (it is no longer 28S). They
    did some experiments and determined that the break allowed 2 fold
    increase in fidelity (accuracy of putting in the correct amino acid)
    without changing the rate of translation.

    It is believed that errors in translation are associated with misfolded proteins and plaque formation that are associated with neurological
    diseases such as Alzheimer's. They claim that squid deal with the issue
    by having over active proteosomes that can absorb and degrade the
    misfolded proteins. It seems to be a quirk of evolution and novel
    feature of one lineage of octopus.

    They do not know what is responsible for the rRNA break. The gene seems
    to be encoded intact and it could be post transcription cleavage. It is
    a unique adaptation, and this is the first example of it. It would be
    neat if it could be adapted to humans. It isn't just neurological
    disorders that are associated with misfolded proteins, but heart
    attacks. The cellular response is called the UPR (unfolded protein
    response).

    It should be noted that CRISPR has been adapted to be able to make
    strand breaks in specific sequences of RNA, so it could be a means to
    adapt any species to have this type of 28S ribosomal two part sequence.

    Ron Okimoto

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